scitech June 2020

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1 participants
3 discussions

OpenMPI stack in danger (Re: Orphaned packages looking for new maintainers)
by Dominik 'Rathann' Mierzejewski 18 Nov '20

18 Nov '20

Hi! On Monday, 25 November 2019 at 10:52, Miro Hrončok wrote: > The following packages are orphaned and will be retired when they > are orphaned for six weeks, unless someone adopts them. If you know for sure > that the package should be retired, please do so now with a proper reason: > https://fedoraproject.org/wiki/How_to_remove_a_package_at_end_of_life > > Note: If you received this mail directly you (co)maintain one of the affected > packages or a package that depends on one. Please adopt the affected package or > retire your depending package to avoid broken dependencies, otherwise your > package will be retired when the affected package gets retired. > > Request package ownership via releng issues: > https://pagure.io/releng/issues > > Full report available at: > https://churchyard.fedorapeople.org/orphans-2019-11-25.txt > grep it for your FAS username and follow the dependency chain. To save time looking this up, I want to direct the attention of pmix and openmpi maintainers (Cc'd) to this chain: munge (orphaned) -> pmix -> openmpi In short, anything that depends on openmpi is at risk of being retired. > Package (co)maintainers Status Change > ================================================================================ [...] > munge orphan 1 weeks ago [...] Regards, Dominik -- Fedora https://getfedora.org | RPM Fusion http://rpmfusion.org There should be a science of discontent. People need hard times and oppression to develop psychic muscles. -- from "Collected Sayings of Muad'Dib" by the Princess Irulan

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Updating hdf5 to 1.10.6 in rawhide side tag
by Orion Poplawski 27 Jun '20

27 Jun '20

I'm updating hdf5 to 1.10.6 in rawhide via side tag f33-build-side-24795. All dependent packages will be rebuilt as well. I believe this is: alembic armadillo avogadro2-libs bes cgnslib CheMPS2 dolfin Field3D freefem++ gdal gdl grads gtatool h5py InsightToolkit jhdf5 LabPlot lammps libminc mathgl matio med moose ncl netcdf octave opencv OpenImageIO openms paraview petsc python-tables R-Rsolid slurm vigra vips votca-csg votca-xtp vtk -- Orion Poplawski Manager of NWRA Technical Systems 720-772-5637 NWRA, Boulder/CoRA Office FAX: 303-415-9702 3380 Mitchell Lane orion(a)nwra.com Boulder, CO 80301 https://www.nwra.com/

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Heads up - %configure and %cmake changes affecting MPI packages
by Orion Poplawski 24 Jun '20

24 Jun '20

This change in redhat-rpm-config: * Wed Jun 03 2020 Igor Raits <ignatenkobrain(a)fedoraproject.org> - 158-1 - Add option to choose C/C++ toolchain changed %_set_build_flags to also set the CC/CXX compiler variables: CC=%{__cc}; export CC ; \ CXX=%{__cxx}; export CXX ; \ This breaks the relatively common construct for building MPI versions of packages: export CC=mpicc export CXX=mpicxx %configure For %configure you can change to: %configure CC=mpicc CXX=mpicxx For %cmake (this will also work with %configure) you'll need to do: %define __cc mpicc %define __cxx mpicxx %cmake With koschei down (I presume it is due to the move) I think this has gone mostly unnoticed so far. HTH, Orion -- Orion Poplawski Manager of NWRA Technical Systems 720-772-5637 NWRA, Boulder/CoRA Office FAX: 303-415-9702 3380 Mitchell Lane orion(a)nwra.com Boulder, CO 80301 https://www.nwra.com/

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scitech June 2020