The following Fedora 28 Security updates need testing: Age URL 138 https://bodhi.fedoraproject.org/updates/FEDORA-2018-d510cfd7eb jgraphx-3.6.0.0-6.fc28 87 https://bodhi.fedoraproject.org/updates/FEDORA-2018-d7aeaa74da nodejs-brace-expansion-1.1.11-1.fc28 86 https://bodhi.fedoraproject.org/updates/FEDORA-2018-bc073fdc1a nodejs-atob-2.1.1-1.fc28 79 https://bodhi.fedoraproject.org/updates/FEDORA-2018-9dd3f7c013 unrtf-0.21.9-8.fc28 47 https://bodhi.fedoraproject.org/updates/FEDORA-2018-28e9841baf docker-latest-1.13.1-37.git9cb56fd.fc28 32 https://bodhi.fedoraproject.org/updates/FEDORA-2018-33fef25ed1 ghc-hakyll-4.10.0.0-3.fc28 pandoc-citeproc-0.12.2.5-4.fc28 ghc-hs-bibutils-6.6.0.0-1.fc28 13 https://bodhi.fedoraproject.org/updates/FEDORA-2018-b1832101b8 tomcat-8.5.32-1.fc28 13 https://bodhi.fedoraproject.org/updates/FEDORA-2018-9565c0bc9a unixODBC-2.3.7-1.fc28 6 https://bodhi.fedoraproject.org/updates/FEDORA-2018-5da38940e3 dolphin-emu-5.0-24.fc28 5 https://bodhi.fedoraproject.org/updates/FEDORA-2018-77e610115a mariadb-10.2.17-1.fc28 4 https://bodhi.fedoraproject.org/updates/FEDORA-2018-f2b24ce26e phpMyAdmin-4.8.3-1.fc28 4 https://bodhi.fedoraproject.org/updates/FEDORA-2018-38bdbafa96 discount-2.2.4-1.fc28 4 https://bodhi.fedoraproject.org/updates/FEDORA-2018-f67fda3db6 community-mysql-5.7.23-1.fc28
The following Fedora 28 Critical Path updates have yet to be approved: Age URL 13 https://bodhi.fedoraproject.org/updates/FEDORA-2018-6076e25d1e python-productmd-1.16-1.fc28 10 https://bodhi.fedoraproject.org/updates/FEDORA-2018-a20e0e3c74 pungi-4.1.27-1.fc28 4 https://bodhi.fedoraproject.org/updates/FEDORA-2018-16c78b3d92 rpm-4.14.2-1.fc28 2 https://bodhi.fedoraproject.org/updates/FEDORA-2018-19774fcd66 kernel-tools-4.17.19-200.fc28 kernel-headers-4.17.19-1.fc28 kernel-4.17.19-200.fc28
The following builds have been pushed to Fedora 28 updates-testing
InsightToolkit-4.9.1-8.fc28 R-RColorBrewer-1.1.2-1.fc28 analitza-18.04.3-2.fc28 appmenu-qt5-0.3.0+16.10.20160628.1-10.fc28 armadillo-9.100.5-1.fc28 calibre-3.29.0-1.fc28 container-selinux-2.71-2.git5721d74.fc28 deepin-qt5integration-0.2.8.3-5.fc28 deepin-terminal-3.0.3-1.fc28 deepin-tool-kit-0.3.3-8.fc28 dnscrypt-proxy-gui-1.11.15-2.fc28 dokuwiki-20180422a-1.fc28 dtkwidget-2.0.6.1-1.fc28.2 duplicity-0.7.18.1-1.fc28 fcitx-qt5-1.2.3-2.fc28 filezilla-3.36.0-1.fc28 gammaray-2.9.0-4.fc28 gdal-2.2.4-3.fc28 globus-gsi-proxy-core-8.6-8.fc28 globus-gssapi-gsi-13.8-3.fc28 globus-proxy-utils-6.19-8.fc28 glusterfs-4.1.3-1.fc28 golang-github-Shopify-sarama-1.7.0-0.8.git87ec8d7.fc28 golang-github-git-lfs-netrc-0-0.1.20180827gite0e9ca4.fc28 golang-github-hashicorp-go-immutable-radix-0-0.11.20180612gitaca1bd0.fc28 gsettings-qt-0-0.8.20170715bzr83.fc28.1 kdevelop-5.2.4-1.fc28 kdevelop-php-5.2.4-1.fc28 kdevelop-python-5.2.4-1.py3.fc28 kf5-akonadi-server-18.04.3-2.fc28 kf5-frameworkintegration-5.48.0-2.fc28 kf5-kdeclarative-5.48.0-2.fc28 kf5-kwayland-5.48.0-2.fc28.1 kf5-kxmlgui-5.48.0-3.fc28 kwin-5.13.4-2.fc28 libfm-qt-0.11.2-12.fc28 libqtxdg-2.0.0-13.fc28 lv2-x42-plugins-0.5.0-0.1.20180803.fc28 lxqt-qtplugin-0.11.1-12.fc28 magic-8.2.66-1.fc28 mlpack-2.2.5-8.fc28 mmseq-1.0.8a-27.fc28 mscore-2.2.1-4.fc28 msgpack-3.1.0-1.fc28 myproxy-6.1.30-3.fc28 nghttp2-1.32.1-1.fc28 nordugrid-arc-5.4.2-9.fc28 perl-Storable-3.11-3.fc28 php-myclabs-php-enum-1.6.2-1.fc28 php-symfony-polyfill-1.9.0-1.fc28 plasma-integration-5.13.4-2.fc28 podman-0.8.4-1.git9f9b8cf.fc28 postgresql-10.5-3.fc28 pyotherside-1.5.3-13.fc28 python-beautifulsoup4-4.6.3-1.fc28 python-dns-lexicon-2.7.0-2.fc28 python-doit-0.31.1-1.fc28 python-qt5-5.10.1-3.fc28 pythonqt-3.2-9.fc28 qgnomeplatform-0.4-2.fc28 qstardict-1.3-4.fc28 qt-creator-4.6.2-2.fc28 qt5-5.11.1-3.fc28 qt5-qt3d-5.11.1-2.fc28 qt5-qtbase-5.11.1-7.fc28 qt5-qtcanvas3d-5.11.1-2.fc28 qt5-qtcharts-5.11.1-4.fc28 qt5-qtconnectivity-5.11.1-2.fc28 qt5-qtdatavis3d-5.11.1-1.fc28 qt5-qtdeclarative-5.11.1-3.fc28 qt5-qtdoc-5.11.1-2.fc28 qt5-qtenginio-1.6.2-16.fc28 qt5-qtgamepad-5.11.1-3.fc28 qt5-qtgraphicaleffects-5.11.1-2.fc28 qt5-qtimageformats-5.11.1-2.fc28 qt5-qtlocation-5.11.1-3.fc28 qt5-qtmultimedia-5.11.1-2.fc28 qt5-qtquickcontrols-5.11.1-2.fc28 qt5-qtquickcontrols2-5.11.1-2.fc28 qt5-qtremoteobjects-5.11.1-3.fc28 qt5-qtscript-5.11.1-2.fc28 qt5-qtscxml-5.11.1-3.fc28 qt5-qtsensors-5.11.1-2.fc28 qt5-qtserialbus-5.11.1-3.fc28 qt5-qtserialport-5.11.1-2.fc28 qt5-qtspeech-5.11.1-2.fc28 qt5-qtstyleplugins-5.0.0-27.fc28 qt5-qtsvg-5.11.1-2.fc28 qt5-qttools-5.11.1-2.fc28 qt5-qttranslations-5.11.1-2.fc28 qt5-qtvirtualkeyboard-5.11.1-2.fc28 qt5-qtwayland-5.11.1-2.fc28 qt5-qtwebchannel-5.11.1-2.fc28 qt5-qtwebengine-5.11.1-4.fc28 qt5-qtwebkit-5.212.0-0.27.alpha2.fc28 qt5-qtwebsockets-5.11.1-2.fc28 qt5-qtwebview-5.11.1-3.fc28 qt5-qtx11extras-5.11.1-2.fc28 qt5-qtxmlpatterns-5.11.1-3.fc28 qt5ct-0.35-2.fc28 root-6.14.04-1.fc28 setBfree-0.8.8-1.fc28 skrooge-2.14.0-1.fc28 switchboard-plug-sound-0.1.1-1.fc28 tcpflow-1.5.0-2.fc28 texmaker-5.0.2-6.fc28 ugene-1.31.0-3.fc28 upx-3.95-1.fc28 vim-8.1.328-1.fc28 xdg-desktop-portal-kde-5.13.4-2.fc28 yara-3.8.1-1.fc28 yarock-1.3.1-2.fc28
Details about builds:
================================================================================ InsightToolkit-4.9.1-8.fc28 (FEDORA-2018-9638c0fdcd) Insight Toolkit library for medical image processing -------------------------------------------------------------------------------- Update Information:
Just a rebuild for updated libraries. -------------------------------------------------------------------------------- ChangeLog:
* Wed Feb 7 2018 Fedora Release Engineering releng@fedoraproject.org - 4.9.1-8 - Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild -------------------------------------------------------------------------------- References:
[ 1 ] Bug #1555479 - InsightToolkit: FTBFS in F28 https://bugzilla.redhat.com/show_bug.cgi?id=1555479 --------------------------------------------------------------------------------
================================================================================ R-RColorBrewer-1.1.2-1.fc28 (FEDORA-2018-a263abea3f) ColorBrewer Palettes -------------------------------------------------------------------------------- Update Information:
Initial package of RColorBrewer for R -------------------------------------------------------------------------------- References:
[ 1 ] Bug #1622331 - Review Request: R-RColorBrewer - ColorBrewer Palettes https://bugzilla.redhat.com/show_bug.cgi?id=1622331 --------------------------------------------------------------------------------
================================================================================ analitza-18.04.3-2.fc28 (FEDORA-2018-bea1e0b465) Library of mathematical features -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Wed Aug 22 2018 Rex Dieter rdieter@fedoraproject.org - 18.04.3-2 - rebuild --------------------------------------------------------------------------------
================================================================================ appmenu-qt5-0.3.0+16.10.20160628.1-10.fc28 (FEDORA-2018-bea1e0b465) Support for global DBus-exported application menu in Qt5 -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Thu Jul 12 2018 Fedora Release Engineering releng@fedoraproject.org - 0.3.0+16.10.20160628.1-10 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild --------------------------------------------------------------------------------
================================================================================ armadillo-9.100.5-1.fc28 (FEDORA-2018-48da79b853) Fast C++ matrix library with syntax similar to MATLAB and Octave -------------------------------------------------------------------------------- Update Information:
Update to the latest stable version of armadillo. The changes are: * faster handling of symmetric/hermitian positive definite matrices by `solve()` * faster handling of `inv_sympd()` in compound expressions * added `.is_symmetric()` * added `.is_hermitian()` * expanded `spsolve()` to optionally allow keeping solutions of systems singular to working precision * new configuration options `ARMA_OPTIMISE_SOLVE_BAND` and `ARMA_OPTIMISE_SOLVE_SYMPD` * smarter use of the element cache in sparse matrices -------------------------------------------------------------------------------- ChangeLog:
* Fri Aug 17 2018 Jos�� Matos jamatos@fedoraproject.org - 9.100.5-1 - update to 9.100.5 - add white lines to improve spec file readability -------------------------------------------------------------------------------- References:
[ 1 ] Bug #1553481 - FTBFS with GCC 8 (F28, Rawhide) https://bugzilla.redhat.com/show_bug.cgi?id=1553481 [ 2 ] Bug #1616257 - armadillo-9.100.5 is available https://bugzilla.redhat.com/show_bug.cgi?id=1616257 --------------------------------------------------------------------------------
================================================================================ calibre-3.29.0-1.fc28 (FEDORA-2018-bea1e0b465) E-book converter and library manager -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Tue Aug 14 2018 Kevin Fenzi kevin@scrye.com - 3.29.0-1 - Update to 3.29.0. Fixes bug #1614778 * Tue Jul 31 2018 Florian Weimer fweimer@redhat.com - 3.28.0-3 - Rebuild with fixed binutils * Fri Jul 27 2018 Igor Gnatenko ignatenkobrain@fedoraproject.org - 3.28.0-2 - Rebuild for new binutils * Thu Jul 26 2018 Kevin Fenzi kevin@scrye.com - 3.28.0-1 - Update to 3.28.0. Fixes bug #1605186 * Thu Jul 26 2018 Zbigniew J��drzejewski-Szmek zbyszek@in.waw.pl - 3.27.1-5 - Use versioned python macros - Do explicit byte compilation to conform to new guidelines * Thu Jul 12 2018 Fedora Release Engineering releng@fedoraproject.org - 3.27.1-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Wed Jul 11 2018 Sandro Mani manisandro@gmail.com - 3.27.1-3 - Rebuild (podofo) * Tue Jul 10 2018 Pete Walter pwalter@fedoraproject.org - 3.27.1-2 - Rebuild for ICU 62 * Sat Jul 7 2018 Zbigniew J��drzejewski-Szmek zbyszek@in.waw.pl - 3.27.1-1 - Update to 3.27.1. Fixes bug #1598761 * Thu Jun 21 2018 Rex Dieter rdieter@fedoraproject.org - 3.26.1-2 - rebuild (qt5) * Fri Jun 15 2018 Kevin Fenzi kevin@scrye.com - 3.26.1-1 - Update to 3.26.1. Fixes bug #1591735 * Sun Jun 3 2018 Kevin Fenzi kevin@scrye.com - 3.25.0-1 - Update to 3.25.0. Fixes bug #1585171 * Wed May 30 2018 Kevin Fenzi kevin@scrye.com - 3.24.2-1 - Update to 3.24.2. * Tue May 29 2018 Rex Dieter rdieter@fedoraproject.org - 3.23.0-2 - rebuild (qt5) * Fri May 4 2018 Kevin Fenzi kevin@scrye.com - 3.23.0-1 - Update to 3.23.0. Fixes bug #1574953 * Mon Apr 30 2018 Pete Walter pwalter@fedoraproject.org - 3.22.1-2 - Rebuild for ICU 61.1 * Fri Apr 20 2018 Kevin Fenzi kevin@scrye.com - 3.22.1-1 - Update to 3.22.1. Fixes bug #1569983 * Sat Apr 7 2018 Kevin Fenzi kevin@scrye.com - 3.21.0-1 - Update to 3.21.0. Fixes bug #1564477 * Fri Mar 23 2018 Kevin Fenzi kevin@scrye.com - 3.20.0-1 - Update to 3.20.0. Fixes bug #1559848 --------------------------------------------------------------------------------
================================================================================ container-selinux-2.71-2.git5721d74.fc28 (FEDORA-2018-0cd1b5be98) SELinux policies for container runtimes -------------------------------------------------------------------------------- Update Information:
Don't error out if /var/lib/containers does not exist. -------------------------------------------------------------------------------- ChangeLog:
* Mon Aug 27 2018 Dan Walsh dwalsh@fedoraproject.org - 2.71-2 - Fix restorecon to not error on missing directory * Wed Aug 22 2018 Dan Walsh dwalsh@fedoraproject.org - 2.71-1 - Allow unconfined_r to transition to system_r over container_runtime_exec_t - Allow unconfined_t to transition to container_runtime_t over container_runtime_exec_t -------------------------------------------------------------------------------- References:
[ 1 ] Bug #1622539 - Scriptlet failure in container-selinux https://bugzilla.redhat.com/show_bug.cgi?id=1622539 [ 2 ] Bug #1622416 - [container-selinux] workstation network installation aborts because of error in POSTIN scriptlet https://bugzilla.redhat.com/show_bug.cgi?id=1622416 --------------------------------------------------------------------------------
================================================================================ deepin-qt5integration-0.2.8.3-5.fc28 (FEDORA-2018-bea1e0b465) Qt platform theme integration plugins for DDE -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 0.2.8.3-5 - rebuild (qt5) --------------------------------------------------------------------------------
================================================================================ deepin-terminal-3.0.3-1.fc28 (FEDORA-2018-8b35bdb9d2) Default terminal emulation application for Deepin -------------------------------------------------------------------------------- Update Information:
Update to 3.0.3 -------------------------------------------------------------------------------- ChangeLog:
* Sat Aug 25 2018 mosquito sensor.wen@gmail.com - 3.0.3-1 - Update to 3.0.3 * Fri Jul 27 2018 mosquito sensor.wen@gmail.com - 3.0.1-1 - Update to 3.0.1 * Thu Jul 12 2018 Fedora Release Engineering releng@fedoraproject.org - 2.9.2-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild --------------------------------------------------------------------------------
================================================================================ deepin-tool-kit-0.3.3-8.fc28 (FEDORA-2018-bea1e0b465) Base development tool of all C++/Qt Developer work on Deepin -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 0.3.3-8 - rebuild (qt5), use %ldconfig_scriptlets --------------------------------------------------------------------------------
================================================================================ dnscrypt-proxy-gui-1.11.15-2.fc28 (FEDORA-2018-bea1e0b465) GUI wrapper for dnscrypt-proxy -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 1.11.15-2 - rebuild (qt5) --------------------------------------------------------------------------------
================================================================================ dokuwiki-20180422a-1.fc28 (FEDORA-2018-be9f4838dd) Standards compliant simple to use wiki -------------------------------------------------------------------------------- Update Information:
Update to upstream version 2018-04-22a -------------------------------------------------------------------------------- ChangeLog:
* Sat Aug 25 2018 Artur Iwicki fedora@svgames.pl - 20180422a-1 - Change the versioning scheme * Mon Aug 20 2018 Artur Iwicki fedora@svgames.pl - 0-0.33.20180422a - Remove the "Group:" tag (no longer used in Fedora) - Replace the hand-written %releasetag with one generated from %releasenum * Fri Jul 13 2018 Peter 'Pessoft' Kol��nek fedora@pessoft.com - 0-0.32.20180422a - Update to the latest stable upstream 2018-04-22a "Greebo" (#1390291: CVE-2016-7964, CVE-2016-7965, CVE-2017-12583, CVE-2017-12979, CVE-2017-12980, CVE-2017-18123) - Fix missing vendor directory issue (#1372948) - Fix Apache config file for access to conf and bin - Replace more bundled code in vendor directory with Fedora packages (lesserphp, random_compat, phpseclib, simplepie) - Fix source to HTTPS * Fri Mar 30 2018 Iryna Shcherbina ishcherb@redhat.com - 0-0.31.20150810a - Update Python 2 dependency declarations to new packaging standards (See https://fedoraproject.org/wiki/FinalizingFedoraSwitchtoPython3) -------------------------------------------------------------------------------- References:
[ 1 ] Bug #1390291 - CVE-2016-7964 CVE-2016-7965 CVE-2017-12583 CVE-2017-12979 CVE-2017-12980 CVE-2017-18123 dokuwiki: Various flaws [fedora-all] https://bugzilla.redhat.com/show_bug.cgi?id=1390291 [ 2 ] Bug #1372948 - Error 500 due to missing vendor directory /usr/share/dokuwiki/vendor https://bugzilla.redhat.com/show_bug.cgi?id=1372948 --------------------------------------------------------------------------------
================================================================================ dtkwidget-2.0.6.1-1.fc28.2 (FEDORA-2018-bea1e0b465) Deepin tool kit widget modules -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Wed Aug 22 2018 Rex Dieter rdieter@fedoraproject.org - 2.0.6.1-1.2 - BR: qt5-qtbase-private-devel * Sun Jul 15 2018 Zamir SUN zsun@fedoraproject.org - 2.0.6.1-1.fc28.1 - Bump version to build for Fedora 28 * Tue Feb 20 2018 mosquito sensor.wen@gmail.com - 2.0.6.1-1 - Update to 2.0.6.1 --------------------------------------------------------------------------------
================================================================================ duplicity-0.7.18.1-1.fc28 (FEDORA-2018-a29fc7839b) Encrypted bandwidth-efficient backup using rsync algorithm -------------------------------------------------------------------------------- Update Information:
https://launchpad.net/duplicity/+announcement/15047 -------------------------------------------------------------------------------- ChangeLog:
* Mon Aug 27 2018 Gwyn Ciesla limburgher@gmail.com - 0.7.18.1-1 - Patch for crash. * Wed Aug 22 2018 Gwyn Ciesla limburgher@gmail.com - 0.7.18-1 - 0.7.18. * Thu Jul 12 2018 Fedora Release Engineering releng@fedoraproject.org - 0.7.17-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild -------------------------------------------------------------------------------- References:
[ 1 ] Bug #1622232 - New crash with 0.7.18 https://bugzilla.redhat.com/show_bug.cgi?id=1622232 --------------------------------------------------------------------------------
================================================================================ fcitx-qt5-1.2.3-2.fc28 (FEDORA-2018-bea1e0b465) Fcitx IM module for Qt5 -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Thu Jun 21 2018 Rex Dieter rdieter@fedoraproject.org - 1.2.3-2 - rebuild (qt5) --------------------------------------------------------------------------------
================================================================================ filezilla-3.36.0-1.fc28 (FEDORA-2018-e1bc79d070) FTP, FTPS and SFTP client -------------------------------------------------------------------------------- Update Information:
3.36.0 -------------------------------------------------------------------------------- ChangeLog:
* Mon Aug 27 2018 Gwyn Ciesla limburgher@gmail.com - 3.36.0-1 - 3.36.0 final * Mon Aug 20 2018 Gwyn Ciesla limburgher@gmail.com - 3.36.0-0.rc1 - 3.36.0 rc1 --------------------------------------------------------------------------------
================================================================================ gammaray-2.9.0-4.fc28 (FEDORA-2018-bea1e0b465) A tool for examining internals of Qt applications -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Thu Aug 23 2018 Rex Dieter rdieter@fedoraproject.org - 2.9.0-4 - drop mkspecs hack causing FTBFS * Fri Jul 13 2018 Fedora Release Engineering releng@fedoraproject.org - 2.9.0-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Thu Jun 21 2018 Rex Dieter rdieter@fedoraproject.org - 2.9.0-2 - rebuild (qt5) * Sat Jun 2 2018 Rex Dieter rdieter@fedoraproject.org - 2.9.0-1 - gammayray-2.9.0 - make qt4 support optional (off for now) * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 2.8.1-9 - rebuild (qt5) * Thu Mar 15 2018 Iryna Shcherbina ishcherb@redhat.com - 2.8.1-8 - Update Python 2 dependency declarations to new packaging standards (See https://fedoraproject.org/wiki/FinalizingFedoraSwitchtoPython3) --------------------------------------------------------------------------------
================================================================================ gdal-2.2.4-3.fc28 (FEDORA-2018-48da79b853) GIS file format library -------------------------------------------------------------------------------- Update Information:
Update to the latest stable version of armadillo. The changes are: * faster handling of symmetric/hermitian positive definite matrices by `solve()` * faster handling of `inv_sympd()` in compound expressions * added `.is_symmetric()` * added `.is_hermitian()` * expanded `spsolve()` to optionally allow keeping solutions of systems singular to working precision * new configuration options `ARMA_OPTIMISE_SOLVE_BAND` and `ARMA_OPTIMISE_SOLVE_SYMPD` * smarter use of the element cache in sparse matrices -------------------------------------------------------------------------------- ChangeLog:
* Mon Aug 27 2018 Jos�� Ab��lio Matos jamatos@fc.up.pt - 2.2.4-3 - rebuild for armadillo soname bump -------------------------------------------------------------------------------- References:
[ 1 ] Bug #1553481 - FTBFS with GCC 8 (F28, Rawhide) https://bugzilla.redhat.com/show_bug.cgi?id=1553481 [ 2 ] Bug #1616257 - armadillo-9.100.5 is available https://bugzilla.redhat.com/show_bug.cgi?id=1616257 --------------------------------------------------------------------------------
================================================================================ globus-gsi-proxy-core-8.6-8.fc28 (FEDORA-2018-b00f50fa3b) Globus Toolkit - Globus GSI Proxy Core Library -------------------------------------------------------------------------------- Update Information:
Increase default proxy key size to 2048 bits. Avoid TLS 1.3 in globus-gssapi- gsi - needs porting. -------------------------------------------------------------------------------- ChangeLog:
* Sun Aug 26 2018 Mattias Ellert mattias.ellert@physics.uu.se - 8.6-8 - Increase default proxy key size to 2048 bits * Fri Jul 13 2018 Fedora Release Engineering releng@fedoraproject.org - 8.6-7 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild --------------------------------------------------------------------------------
================================================================================ globus-gssapi-gsi-13.8-3.fc28 (FEDORA-2018-b00f50fa3b) Globus Toolkit - GSSAPI library -------------------------------------------------------------------------------- Update Information:
Increase default proxy key size to 2048 bits. Avoid TLS 1.3 in globus-gssapi- gsi - needs porting. -------------------------------------------------------------------------------- ChangeLog:
* Sun Aug 26 2018 Mattias Ellert mattias.ellert@physics.uu.se - 13.8-3 - Avoid TLS 1.3 - needs porting * Fri Jul 13 2018 Fedora Release Engineering releng@fedoraproject.org - 13.8-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild --------------------------------------------------------------------------------
================================================================================ globus-proxy-utils-6.19-8.fc28 (FEDORA-2018-b00f50fa3b) Globus Toolkit - Globus GSI Proxy Utility Programs -------------------------------------------------------------------------------- Update Information:
Increase default proxy key size to 2048 bits. Avoid TLS 1.3 in globus-gssapi- gsi - needs porting. -------------------------------------------------------------------------------- ChangeLog:
* Sun Aug 26 2018 Mattias Ellert mattias.ellert@physics.uu.se - 6.19-8 - Increase default proxy key size to 2048 bits * Fri Jul 13 2018 Fedora Release Engineering releng@fedoraproject.org - 6.19-7 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild --------------------------------------------------------------------------------
================================================================================ glusterfs-4.1.3-1.fc28 (FEDORA-2018-93b269fa36) Distributed File System -------------------------------------------------------------------------------- Update Information:
4.1.3 GA -------------------------------------------------------------------------------- ChangeLog:
* Mon Aug 27 2018 Kaleb S. KEITHLEY <kkeithle[at]redhat.com> - 4.1.3-1 - 4.1.3 GA --------------------------------------------------------------------------------
================================================================================ golang-github-Shopify-sarama-1.7.0-0.8.git87ec8d7.fc28 (FEDORA-2018-7355209f88) Sarama is a Go library for Apache Kafka 0.8 and 0.9 -------------------------------------------------------------------------------- Update Information:
Disable the failing tests -------------------------------------------------------------------------------- ChangeLog:
* Mon Aug 27 2018 Jan Chaloupka jchaloup@redhat.com - 1.7.0-0.8.git87ec8d7 - Disable tests resolves: #1555780 * Fri Jul 13 2018 Fedora Release Engineering releng@fedoraproject.org - 1.7.0-0.7.git87ec8d7 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Wed Feb 7 2018 Fedora Release Engineering releng@fedoraproject.org - 1.7.0-0.6.git87ec8d7 - Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild * Wed Aug 2 2017 Fedora Release Engineering releng@fedoraproject.org - 1.7.0-0.5.git87ec8d7 - Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild * Wed Jul 26 2017 Fedora Release Engineering releng@fedoraproject.org - 1.7.0-0.4.git87ec8d7 - Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild * Fri Feb 10 2017 Fedora Release Engineering releng@fedoraproject.org - 1.7.0-0.3.git87ec8d7 - Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild -------------------------------------------------------------------------------- References:
[ 1 ] Bug #1604187 - golang-github-Shopify-sarama: FTBFS in Fedora rawhide https://bugzilla.redhat.com/show_bug.cgi?id=1604187 [ 2 ] Bug #1555780 - golang-github-Shopify-sarama: FTBFS in F28 https://bugzilla.redhat.com/show_bug.cgi?id=1555780 --------------------------------------------------------------------------------
================================================================================ golang-github-git-lfs-netrc-0-0.1.20180827gite0e9ca4.fc28 (FEDORA-2018-8816410875) A Golang package for reading and writing netrc files -------------------------------------------------------------------------------- Update Information:
Initial package for Fedora -------------------------------------------------------------------------------- References:
[ 1 ] Bug #1584973 - Review Request: golang-github-git-lfs-netrc - A Golang package for reading and writing netrc files https://bugzilla.redhat.com/show_bug.cgi?id=1584973 --------------------------------------------------------------------------------
================================================================================ golang-github-hashicorp-go-immutable-radix-0-0.11.20180612gitaca1bd0.fc28 (FEDORA-2018-2001b0b886) An immutable radix tree implementation in Golang -------------------------------------------------------------------------------- Update Information:
Rebuild -------------------------------------------------------------------------------- ChangeLog:
* Fri Jul 13 2018 Fedora Release Engineering releng@fedoraproject.org - Forge-specific packaging variables - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jun 12 2018 Jan Chaloupka jchaloup@redhat.com - 0-0.10.gitaca1bd0 - Upload glide files * Wed Feb 28 2018 Jan Chaloupka jchaloup@redhat.com - 0-0.9.20151012gitaca1bd0 - Autogenerate some parts using the new macros * Wed Feb 7 2018 Fedora Release Engineering releng@fedoraproject.org - 0-0.8.gitaca1bd0 - Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild -------------------------------------------------------------------------------- References:
[ 1 ] Bug #1555805 - golang-github-hashicorp-go-immutable-radix: FTBFS in F28 https://bugzilla.redhat.com/show_bug.cgi?id=1555805 --------------------------------------------------------------------------------
================================================================================ gsettings-qt-0-0.8.20170715bzr83.fc28.1 (FEDORA-2018-bea1e0b465) Qt/QML bindings for GSettings -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. --------------------------------------------------------------------------------
================================================================================ kdevelop-5.2.4-1.fc28 (FEDORA-2018-bf0cdec596) Integrated Development Environment for C++/C -------------------------------------------------------------------------------- Update Information:
KDevelop 5.2.4 release. See https://www.kdevelop.org/news/kdevelop-524-released for more information. -------------------------------------------------------------------------------- ChangeLog:
* Mon Aug 27 2018 Jan Grulich jgrulich@redhat.com - 5.2.4-1 - 5.2.4 * Thu Aug 16 2018 Than Ngo than@redhat.com - 5.2.3-4 - fixed #1405880, prefer qmake-qt5 - fixed #1518465, prefer bash and drop zsh dependency * Mon Jul 23 2018 Than Ngo than@redhat.com - 5.2.3-3 - fixed FTBFS * Fri Jul 13 2018 Fedora Release Engineering releng@fedoraproject.org - 9:5.2.3-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild --------------------------------------------------------------------------------
================================================================================ kdevelop-php-5.2.4-1.fc28 (FEDORA-2018-bf0cdec596) Php language and documentation plugins for KDevelop -------------------------------------------------------------------------------- Update Information:
KDevelop 5.2.4 release. See https://www.kdevelop.org/news/kdevelop-524-released for more information. -------------------------------------------------------------------------------- ChangeLog:
* Mon Aug 27 2018 Jan Grulich jgrulich@redhat.com - 5.2.4-1 - 5.2.4 * Fri Jul 13 2018 Fedora Release Engineering releng@fedoraproject.org - 5.2.3-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild --------------------------------------------------------------------------------
================================================================================ kdevelop-python-5.2.4-1.py3.fc28 (FEDORA-2018-bf0cdec596) Python 3 Plugin for KDevelop -------------------------------------------------------------------------------- Update Information:
KDevelop 5.2.4 release. See https://www.kdevelop.org/news/kdevelop-524-released for more information. -------------------------------------------------------------------------------- ChangeLog:
* Mon Aug 27 2018 Jan Grulich jgrulich@redhat.com - 5.2.4-1.py3 - 5.2.4 * Fri Jul 13 2018 Fedora Release Engineering releng@fedoraproject.org - 5.2.3-4.py3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Thu Jul 12 2018 Sandro Mani manisandro@gmail.com - 5.2.3-3.py3 - Fix FTBFS due to syntax error due to async being a reserved keyword in python3.7 * Tue Jun 19 2018 Miro Hron��ok mhroncok@redhat.com - 5.2.3-2.py3 - Rebuilt for Python 3.7 --------------------------------------------------------------------------------
================================================================================ kf5-akonadi-server-18.04.3-2.fc28 (FEDORA-2018-bea1e0b465) PIM Storage Service -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Wed Aug 22 2018 Rex Dieter rdieter@fedoraproject.org - 18.04.3-2 - rebuild (qt5) --------------------------------------------------------------------------------
================================================================================ kf5-frameworkintegration-5.48.0-2.fc28 (FEDORA-2018-bea1e0b465) KDE Frameworks 5 Tier 4 workspace and cross-framework integration plugins -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Wed Aug 22 2018 Rex Dieter rdieter@fedoraproject.org - 5.48.0-2 - branch rebuild (qt5) --------------------------------------------------------------------------------
================================================================================ kf5-kdeclarative-5.48.0-2.fc28 (FEDORA-2018-bea1e0b465) KDE Frameworks 5 Tier 3 addon for Qt declarative -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Wed Aug 22 2018 Rex Dieter rdieter@fedoraproject.org - 5.48.0-2 - branch rebuild (qt5) --------------------------------------------------------------------------------
================================================================================ kf5-kwayland-5.48.0-2.fc28.1 (FEDORA-2018-bea1e0b465) KDE Frameworks 5 library that wraps Client and Server Wayland libraries -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Wed Aug 22 2018 Rex Dieter rdieter@fedoraproject.org - 5.48.0-3 - branch rebuild (qt5) --------------------------------------------------------------------------------
================================================================================ kf5-kxmlgui-5.48.0-3.fc28 (FEDORA-2018-bea1e0b465) KDE Frameworks 5 Tier 3 solution for user-configurable main windows -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Wed Aug 22 2018 Rex Dieter rdieter@fedoraproject.org - 5.48.0-3 - branch rebuild (qt5) --------------------------------------------------------------------------------
================================================================================ kwin-5.13.4-2.fc28 (FEDORA-2018-bea1e0b465) KDE Window manager -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Fri Aug 24 2018 Rex Dieter rdieter@fedoraproject.org - 5.13.4-2 - rebuild --------------------------------------------------------------------------------
================================================================================ libfm-qt-0.11.2-12.fc28 (FEDORA-2018-bea1e0b465) Companion library for PCManFM -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 0.11.2-12 - rebuild (qt5) --------------------------------------------------------------------------------
================================================================================ libqtxdg-2.0.0-13.fc28 (FEDORA-2018-bea1e0b465) QtXdg, a Qt5 implementation of XDG standards -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 2.0.0-13 - rebuild (qt5) * Wed Mar 7 2018 Rex Dieter rdieter@fedoraproject.org - 2.0.0-12 - .spec cleanup, BR: gcc-c++, use %license %make_build --------------------------------------------------------------------------------
================================================================================ lv2-x42-plugins-0.5.0-0.1.20180803.fc28 (FEDORA-2018-b0884d5ca5) A number of LV2 plugins -------------------------------------------------------------------------------- Update Information:
Update to 20180803 -------------------------------------------------------------------------------- ChangeLog:
* Mon Aug 27 2018 Guido Aulisi guido.aulisi@gmail.com - 0.5.0-0.1.20180803 - Update to 20180803 - New dpl plugin --------------------------------------------------------------------------------
================================================================================ lxqt-qtplugin-0.11.1-12.fc28 (FEDORA-2018-bea1e0b465) Qt plugin framework for LXQt Desktop Suite -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 0.11.1-12 - rebuild (qt5) --------------------------------------------------------------------------------
================================================================================ magic-8.2.66-1.fc28 (FEDORA-2018-92769c3e89) A very capable VLSI layout tool -------------------------------------------------------------------------------- Update Information:
New version 8.2.66 is released. -------------------------------------------------------------------------------- ChangeLog:
* Sat Aug 24 2019 Mamoru TASAKA mtasaka@fedoraproject.org - 8.2.66-1 - 8.2.66 * Tue Jul 31 2018 Florian Weimer fweimer@redhat.com - 8.2.65-2 - Rebuild with fixed binutils --------------------------------------------------------------------------------
================================================================================ mlpack-2.2.5-8.fc28 (FEDORA-2018-48da79b853) Scalable, fast C++ machine learning library -------------------------------------------------------------------------------- Update Information:
Update to the latest stable version of armadillo. The changes are: * faster handling of symmetric/hermitian positive definite matrices by `solve()` * faster handling of `inv_sympd()` in compound expressions * added `.is_symmetric()` * added `.is_hermitian()` * expanded `spsolve()` to optionally allow keeping solutions of systems singular to working precision * new configuration options `ARMA_OPTIMISE_SOLVE_BAND` and `ARMA_OPTIMISE_SOLVE_SYMPD` * smarter use of the element cache in sparse matrices -------------------------------------------------------------------------------- ChangeLog:
* Fri Aug 17 2018 Jos�� Ab��lio Matos jamatos@fc.up.pt - 2.2.5-8 - rebuild for armadillo soname bump * Fri Jul 13 2018 Fedora Release Engineering releng@fedoraproject.org - 2.2.5-7 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild -------------------------------------------------------------------------------- References:
[ 1 ] Bug #1553481 - FTBFS with GCC 8 (F28, Rawhide) https://bugzilla.redhat.com/show_bug.cgi?id=1553481 [ 2 ] Bug #1616257 - armadillo-9.100.5 is available https://bugzilla.redhat.com/show_bug.cgi?id=1616257 --------------------------------------------------------------------------------
================================================================================ mmseq-1.0.8a-27.fc28 (FEDORA-2018-48da79b853) Haplotype and isoform specific expression estimation for RNA-seq -------------------------------------------------------------------------------- Update Information:
Update to the latest stable version of armadillo. The changes are: * faster handling of symmetric/hermitian positive definite matrices by `solve()` * faster handling of `inv_sympd()` in compound expressions * added `.is_symmetric()` * added `.is_hermitian()` * expanded `spsolve()` to optionally allow keeping solutions of systems singular to working precision * new configuration options `ARMA_OPTIMISE_SOLVE_BAND` and `ARMA_OPTIMISE_SOLVE_SYMPD` * smarter use of the element cache in sparse matrices -------------------------------------------------------------------------------- ChangeLog:
* Fri Aug 17 2018 Jos�� Ab��lio Matos jamatos@fc.up.pt - 1.0.8a-27 - rebuild for armadillo soname bump * Fri Jul 13 2018 Fedora Release Engineering releng@fedoraproject.org - 1.0.8a-26 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Thu Feb 8 2018 Fedora Release Engineering releng@fedoraproject.org - 1.0.8a-25 - Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild -------------------------------------------------------------------------------- References:
[ 1 ] Bug #1553481 - FTBFS with GCC 8 (F28, Rawhide) https://bugzilla.redhat.com/show_bug.cgi?id=1553481 [ 2 ] Bug #1616257 - armadillo-9.100.5 is available https://bugzilla.redhat.com/show_bug.cgi?id=1616257 --------------------------------------------------------------------------------
================================================================================ mscore-2.2.1-4.fc28 (FEDORA-2018-bea1e0b465) Music Composition & Notation Software -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Thu Jun 21 2018 Rex Dieter rdieter@fedoraproject.org - 2.2.1-4 - rebuild (qt5) * Thu May 31 2018 Orcan Ogetbil <oget[DOT]fedora[AT]gmail[DOT]com> - 2.2.1-3 - Fix missing include for qt >= 5.11 (RHBZ#1584834) * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 2.2.1-2 - rebuild (qt5) --------------------------------------------------------------------------------
================================================================================ msgpack-3.1.0-1.fc28 (FEDORA-2018-269e7fa6a4) Binary-based efficient object serialization library -------------------------------------------------------------------------------- Update Information:
Update to the new upstream release: https://github.com/msgpack/msgpack-c/releases/tag/cpp-3.1.0 -------------------------------------------------------------------------------- ChangeLog:
* Wed Aug 22 2018 Daiki Ueno dueno@redhat.com - 3.1.0-1 - new upstream release - cmake configuration files no longer rely on nonexistent static libraries * Fri Jul 13 2018 Fedora Release Engineering releng@fedoraproject.org - 3.0.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild -------------------------------------------------------------------------------- References:
[ 1 ] Bug #1596164 - msgpack cmake configuration files not working https://bugzilla.redhat.com/show_bug.cgi?id=1596164 --------------------------------------------------------------------------------
================================================================================ myproxy-6.1.30-3.fc28 (FEDORA-2018-b00f50fa3b) Manage X.509 Public Key Infrastructure (PKI) security credentials -------------------------------------------------------------------------------- Update Information:
Increase default proxy key size to 2048 bits. Avoid TLS 1.3 in globus-gssapi- gsi - needs porting. -------------------------------------------------------------------------------- ChangeLog:
* Sun Aug 26 2018 Mattias Ellert mattias.ellert@physics.uu.se - 6.1.30-3 - Use 2048 bit CA key for myproxy tests * Fri Jul 13 2018 Fedora Release Engineering releng@fedoraproject.org - 6.1.30-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild --------------------------------------------------------------------------------
================================================================================ nghttp2-1.32.1-1.fc28 (FEDORA-2018-3297fa49e1) Experimental HTTP/2 client, server and proxy -------------------------------------------------------------------------------- Update Information:
- update to the latest upstream bugfix release -------------------------------------------------------------------------------- ChangeLog:
* Mon Aug 27 2018 Kamil Dudka kdudka@redhat.com 1.32.1-1 - update to the latest upstream bugfix release * Fri Jul 13 2018 Fedora Release Engineering releng@fedoraproject.org - 1.32.0-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild --------------------------------------------------------------------------------
================================================================================ nordugrid-arc-5.4.2-9.fc28 (FEDORA-2018-c7d55189fc) Advanced Resource Connector Grid Middleware -------------------------------------------------------------------------------- Update Information:
Backported bugfixes from upstream. -------------------------------------------------------------------------------- ChangeLog:
* Fri Aug 24 2018 Mattias Ellert mattias.ellert@physics.uu.se - 5.4.2-9 - Various bugfixes from upstream - Respect s3 port number (nordugrid bugz 3701) - Adding support for RTE arguments in xRSL (nordugrid bugz 3705) - Small fix for Perl warnings (nordugrid bugz 3074) - Add empty Default-Start LSB keyword to avoid warnings - Fix shebangs to request python2 - Use consistent 'unused' python shebangs - Handle twisted API change in v18.4 (nordugrid bugz 3733) - Run sub-process with the same python executable as main process - Relax FQDN demands in condor history file (GGUS #134645) - Fix -h processing in options parser (nordugrid bugz 3725) * Mon Jul 16 2018 Mattias Ellert mattias.ellert@physics.uu.se - 5.4.2-8 - Explicitly request --with-python=python2 - Fix pylint error with new pylint * Fri Jul 13 2018 Fedora Release Engineering releng@fedoraproject.org - 5.4.2-7 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jun 19 2018 Miro Hron��ok mhroncok@redhat.com - 5.4.2-6 - Rebuilt for Python 3.7 --------------------------------------------------------------------------------
================================================================================ perl-Storable-3.11-3.fc28 (FEDORA-2018-1c7bb93f9b) Persistence for Perl data structures -------------------------------------------------------------------------------- Update Information:
This release fixes a recursion check that miscalculated the recursion depth. -------------------------------------------------------------------------------- ChangeLog:
* Mon Aug 27 2018 Petr Pisar ppisar@redhat.com - 1:3.11-3 - Fix recursion check (RT#133326) --------------------------------------------------------------------------------
================================================================================ php-myclabs-php-enum-1.6.2-1.fc28 (FEDORA-2018-cd2d36e2fe) PHP Enum implementation -------------------------------------------------------------------------------- Update Information:
**Version 1.6.2** * Performance optimizations -------------------------------------------------------------------------------- ChangeLog:
* Fri Aug 24 2018 Remi Collet remi@remirepo.net - 1.6.2-1 - update to 1.6.2 --------------------------------------------------------------------------------
================================================================================ php-symfony-polyfill-1.9.0-1.fc28 (FEDORA-2018-4c2b0845f0) Symfony polyfills backporting features to lower PHP versions -------------------------------------------------------------------------------- Update Information:
**Version v1.9.0** * added polyfill for `hrtime()` * added polyfills for `array_key_first()` and `array_key_last()` * fixed infinite loop in `iconv()` polyfill when using translit mode * fixed converting to title case with mbstring polyfill -------------------------------------------------------------------------------- ChangeLog:
* Mon Aug 27 2018 Remi Collet remi@remirepo.net - 1.9.0-1 - update to 1.9.0 * Mon Jul 16 2018 Remi Collet remi@remirepo.net - 1.8.0-3 - raise dependency on PHP 7 and ignore dependencies on ircmaxell/password-compat and paragonie/random_compat * Fri Jul 13 2018 Fedora Release Engineering releng@fedoraproject.org - 1.8.0-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild --------------------------------------------------------------------------------
================================================================================ plasma-integration-5.13.4-2.fc28 (FEDORA-2018-bea1e0b465) Qt Platform Theme integration plugin for Plasma -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Wed Aug 22 2018 Rex Dieter rdieter@fedoraproject.org - 5.13.4-2 - rebuild --------------------------------------------------------------------------------
================================================================================ podman-0.8.4-1.git9f9b8cf.fc28 (FEDORA-2018-f1f3b41ec3) Manage Pods, Containers and Container Images -------------------------------------------------------------------------------- Update Information:
Bump for new version. -------------------------------------------------------------------------------- ChangeLog:
* Sun Aug 26 2018 Dan Walsh dwalsh@redhat.com - 0.8.4-1.git9f9b8c - Upstream 0.8.4 release * Wed Aug 22 2018 Lokesh Mandvekar lsm5@fedoraproject.org - 0.8.3-4.git9d09a4 - Resolves: #1619411 - python3-podman requires python3-psutil * Wed Aug 22 2018 Lokesh Mandvekar lsm5@fedoraproject.org - 0.8.3-3.git9d09a4 - podman-docker conflicts with moby-engine - podman requires containernetworking-plugins, nftables - use default %gobuild definition * Tue Aug 21 2018 baude bbaude@redhat.com - 0.8.3-2.git9d09a4 - Remove requires buildah --------------------------------------------------------------------------------
================================================================================ postgresql-10.5-3.fc28 (FEDORA-2018-8870ed56fa) PostgreSQL client programs -------------------------------------------------------------------------------- Update Information:
devel subpackage provides libpq-devel, postgresql-server-devel and libecpg-devel -------------------------------------------------------------------------------- ChangeLog:
* Mon Aug 27 2018 Pavel Raiskup praiskup@redhat.com - 10.5-3 - devel subpackage provides postgresql-server-devel and libecpg-devel (first step for rhbz#1618698) * Mon Aug 27 2018 Pavel Raiskup praiskup@redhat.com - 10.5-2 - packaging cleanup - devel subpackage to provide libpq-devel (first step for rhbz#1618698) -------------------------------------------------------------------------------- References:
[ 1 ] Bug #1618698 - [modularity] drop postgresql-libs - create libpq.spec and libecpg.spec instead https://bugzilla.redhat.com/show_bug.cgi?id=1618698 --------------------------------------------------------------------------------
================================================================================ pyotherside-1.5.3-13.fc28 (FEDORA-2018-bea1e0b465) Asynchronous Python 3 Bindings for Qt 5 -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Wed Aug 22 2018 Rex Dieter rdieter@fedoraproject.org - 1.5.3-13 - better exclude fix * Tue Jul 17 2018 Martin Kolman mkolman@redhat.com - 1.5.3-12 - fix exclude for qtquicktests * Fri Jul 13 2018 Fedora Release Engineering releng@fedoraproject.org - 1.5.3-11 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Mon Jul 2 2018 Miro Hron��ok mhroncok@redhat.com - 1.5.3-10 - Rebuilt for Python 3.7 * Thu Jun 21 2018 Rex Dieter rdieter@fedoraproject.org - 1.5.3-9 - rebuild (qt5) * Tue Jun 19 2018 Miro Hron��ok mhroncok@redhat.com - 1.5.3-8 - Rebuilt for Python 3.7 * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 1.5.3-7 - rebuild (qt) - use %make_build %license --------------------------------------------------------------------------------
================================================================================ python-beautifulsoup4-4.6.3-1.fc28 (FEDORA-2018-99112fc1a0) HTML/XML parser for quick-turnaround applications like screen-scraping -------------------------------------------------------------------------------- Update Information:
Update to latest upstream release beautifulsoup 4.6.3. -------------------------------------------------------------------------------- ChangeLog:
* Mon Aug 27 2018 Terje Rosten terje.rosten@ntnu.no - 4.6.3-1 - 4.6.3 * Mon Jul 30 2018 Terje Rosten terje.rosten@ntnu.no - 4.6.1-1 - 4.6.1 * Fri Jul 13 2018 Fedora Release Engineering releng@fedoraproject.org - 4.6.0-8 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Sun Jun 17 2018 Miro Hron��ok mhroncok@redhat.com - 4.6.0-7 - Rebuilt for Python 3.7 -------------------------------------------------------------------------------- References:
[ 1 ] Bug #1615177 - python-beautifulsoup4-4.6.3 is available https://bugzilla.redhat.com/show_bug.cgi?id=1615177 --------------------------------------------------------------------------------
================================================================================ python-dns-lexicon-2.7.0-2.fc28 (FEDORA-2018-0574efb8ca) Manipulate DNS records on various DNS providers in a standardized/agnostic way -------------------------------------------------------------------------------- Update Information:
Add missing dependency on python-cryptography. -------------------------------------------------------------------------------- ChangeLog:
* Mon Aug 27 2018 Eli Young elyscape@gmail.com - 2.7.0-2 - Add dependency on python-cryptography (#1622418) -------------------------------------------------------------------------------- References:
[ 1 ] Bug #1622418 - python-dns-lexicon should require python-cryptography https://bugzilla.redhat.com/show_bug.cgi?id=1622418 --------------------------------------------------------------------------------
================================================================================ python-doit-0.31.1-1.fc28 (FEDORA-2018-64a482209d) Automation Tool -------------------------------------------------------------------------------- Update Information:
Update to the latest stable release. The changes since the last version, mostly bug fixes with some enhancements, are described in the `CHANGES` file. -------------------------------------------------------------------------------- ChangeLog:
* Mon Aug 27 2018 Jos�� Matos jamatos@fedoraproject.org - 0.31.1-1 - update to 0.31.1 - remove bundled egg-info - identify the license * Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 0.30.3-5 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jun 19 2018 Miro Hron��ok mhroncok@redhat.com - 0.30.3-4 - Rebuilt for Python 3.7 -------------------------------------------------------------------------------- References:
[ 1 ] Bug #1548836 - python-doit-0.31.1 is available https://bugzilla.redhat.com/show_bug.cgi?id=1548836 --------------------------------------------------------------------------------
================================================================================ python-qt5-5.10.1-3.fc28 (FEDORA-2018-bea1e0b465) PyQt5 is Python bindings for Qt5 -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Wed Aug 22 2018 Rex Dieter rdieter@fedoraproject.org - 5.10.1-3 - branch rebuild (qt5) - qt511.patch * Tue Mar 20 2018 Zbigniew J��drzejewski-Szmek zbyszek@in.waw.pl - 5.10.1-2 - Add missing %python_provide macros - Rename python2 packages to python2-* * Tue Mar 6 2018 Rex Dieter rdieter@fedoraproject.org - 5.10.1-1 - 5.10.1, use %make_build * Sat Mar 3 2018 S��rgio Basto sergio@serjux.com - 5.10-4 - Enable python3 on epel7 --------------------------------------------------------------------------------
================================================================================ pythonqt-3.2-9.fc28 (FEDORA-2018-bea1e0b465) Lightweight script binding of the Qt framework to the Python language -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Mon May 28 2018 Rex Dieter rdieter@fedoraproject.org - 3.2-9 - rebuild (qt5) --------------------------------------------------------------------------------
================================================================================ qgnomeplatform-0.4-2.fc28 (FEDORA-2018-bea1e0b465) Qt Platform Theme aimed to accommodate Gnome settings -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Fri Aug 24 2018 Rex Dieter rdieter@fedoraproject.org - 0.4-2 - rebuild --------------------------------------------------------------------------------
================================================================================ qstardict-1.3-4.fc28 (FEDORA-2018-bea1e0b465) StarDict clone written using Qt -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 1.3-4 - rebuild (qt5) --------------------------------------------------------------------------------
================================================================================ qt-creator-4.6.2-2.fc28 (FEDORA-2018-bea1e0b465) Cross-platform IDE for Qt -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Fri Aug 24 2018 Rex Dieter rdieter@fedoraproject.org - 4.6.2-2 - branch rebuild (qt5) --------------------------------------------------------------------------------
================================================================================ qt5-5.11.1-3.fc28 (FEDORA-2018-bea1e0b465) Qt5 meta package -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Fri Jun 29 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-2 - %_qt5_prefix=%_prefix (was %_libdir/qt5} * Tue Jun 19 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sat Jun 2 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-2 - rpm-macros: do not define _qt5_archdatadir, _qt5_bindir in terms of _qt5_prefix anymore * Sat May 26 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 --------------------------------------------------------------------------------
================================================================================ qt5-qt3d-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465) Qt5 - Qt3D QML bindings and C++ APIs -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jun 19 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 - use %make_build %ldconfig_scriptlets * Thu Mar 8 2018 Rex Dieter rdieter@fedoraproject.org - 5.10.1-2 - BR: qt5-rpm-macros --------------------------------------------------------------------------------
================================================================================ qt5-qtbase-5.11.1-7.fc28 (FEDORA-2018-bea1e0b465) Qt5 - QtBase components -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Thu Jul 26 2018 Than Ngo than@redhat.com - 5.11.1-7 - fixed FTBFS * Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-6 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jul 10 2018 Pete Walter pwalter@fedoraproject.org - 5.11.1-5 - Rebuild for ICU 62 * Mon Jul 2 2018 Than Ngo than@redhat.com - 5.11.1-4 - fixed bz#1597110 - BRP mangle shebangs and calculation of provides should ignore backups files * Fri Jun 29 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-3 - apply sse2-related multilib hack on < f29 only - safer %_qt5_prefix, %qt5_archdatadir ownership - rebuild for %_qt5_prefix = %_prefix * Sat Jun 23 2018 Than Ngo than@redhat.com - 5.11.1-2 - fixed #1592146, python3 * Tue Jun 19 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 - relax qt5-rpm-macros dep - drop workaround for QTBUG-37417 - drop CMake-Restore-qt5_use_modules-function.patch (upstreamed) * Mon Jun 18 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-3 - backport CMake-Restore-qt5_use_modules-function.patch - %build: %ix86 --no-sse2 on < f29 only * Wed May 30 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-2 - move libQt5EglFSDeviceIntegration to -gui (#1557223) * Tue May 22 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 - drop support for inject_optflags (not used since f23) * Mon Apr 30 2018 Pete Walter pwalter@fedoraproject.org - 5.10.1-8 - Rebuild for ICU 61.1 * Thu Mar 8 2018 Rex Dieter rdieter@fedoraproject.org - 5.10.1-7 - enforce qt5-rpm-macros versioning - BR: gcc-c++ - Qt5.pc: fix version, add %check --------------------------------------------------------------------------------
================================================================================ qt5-qtcanvas3d-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465) Qt5 - Canvas3d component -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jun 19 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 * Thu Mar 8 2018 Rex Dieter rdieter@fedoraproject.org - 5.10.1-2 - BR: qt5-rpm-macros --------------------------------------------------------------------------------
================================================================================ qt5-qtcharts-5.11.1-4.fc28 (FEDORA-2018-bea1e0b465) Qt5 - Charts component -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sun Jul 15 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-4 - use %{_qt5_archdatadir}/mkspecs * Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jun 19 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 - use %make_build %ldconfig_scriptlets --------------------------------------------------------------------------------
================================================================================ qt5-qtconnectivity-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465) Qt5 - Connectivity components -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jun 19 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 - use %make_build %ldconfig_scriptlets --------------------------------------------------------------------------------
================================================================================ qt5-qtdatavis3d-5.11.1-1.fc28 (FEDORA-2018-bea1e0b465) Qt5 - Qt Data Visualization component -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sun Jul 15 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 - use %make_build %ldconfig_scriptlets - use %{_qt5_archdatadir}/mkspecs * Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.10.0-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild --------------------------------------------------------------------------------
================================================================================ qt5-qtdeclarative-5.11.1-3.fc28 (FEDORA-2018-bea1e0b465) Qt5 - QtDeclarative component -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sun Jul 15 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-3 - BR: /usr/bin/python * Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild --------------------------------------------------------------------------------
================================================================================ qt5-qtdoc-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465) Main Qt5 Reference Documentation -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jun 19 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 - use %make_build - use unversioned BR: qt5-qtbase-devel --------------------------------------------------------------------------------
================================================================================ qt5-qtenginio-1.6.2-16.fc28 (FEDORA-2018-bea1e0b465) Qt5 - Enginio component -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Tue May 29 2018 Rex Dieter rdieter@fedoraproject.org - 1.6.2-16 - rebuild (qt5) --------------------------------------------------------------------------------
================================================================================ qt5-qtgamepad-5.11.1-3.fc28 (FEDORA-2018-bea1e0b465) Qt5 - Gamepad component -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sun Jul 15 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-3 - use %{_qt5_archdatadir}/mkspecs * Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jun 19 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 - use %make_build %ldconfig_scriptlets --------------------------------------------------------------------------------
================================================================================ qt5-qtgraphicaleffects-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465) Qt5 - QtGraphicalEffects component -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jun 19 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 - use %make_build --------------------------------------------------------------------------------
================================================================================ qt5-qtimageformats-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465) Qt5 - QtImageFormats component -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jun 19 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 - use %make_build --------------------------------------------------------------------------------
================================================================================ qt5-qtlocation-5.11.1-3.fc28 (FEDORA-2018-bea1e0b465) Qt5 - Location component -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jul 10 2018 Pete Walter pwalter@fedoraproject.org - 5.11.1-2 - Rebuild for ICU 62 * Tue Jun 19 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 - drop old G_INIT_VALUE patch (el6 too old anyway) * Mon Apr 30 2018 Pete Walter pwalter@fedoraproject.org - 5.10.1-4 - Rebuild for ICU 61.1 --------------------------------------------------------------------------------
================================================================================ qt5-qtmultimedia-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465) Qt5 - Multimedia support -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jun 19 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 - use %make_build %ldconfig_scriptlets --------------------------------------------------------------------------------
================================================================================ qt5-qtquickcontrols-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465) Qt5 - module with set of QtQuick controls -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jun 19 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 - use %license %make_build --------------------------------------------------------------------------------
================================================================================ qt5-qtquickcontrols2-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465) Qt5 - module with set of QtQuick controls for embedded -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jun 19 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 - use %make_build %ldconfig_scriptlets --------------------------------------------------------------------------------
================================================================================ qt5-qtremoteobjects-5.11.1-3.fc28 (FEDORA-2018-bea1e0b465) Qt5 - Qt Remote Objects -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sun Jul 15 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-3 - use %{_qt5_archdatadir}/mkspecs * Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jun 19 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 - use %ldconfig_scriptlets %license %make_build --------------------------------------------------------------------------------
================================================================================ qt5-qtscript-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465) Qt5 - QtScript component -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jun 19 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sat May 26 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 * Wed May 9 2018 Rex Dieter rdieter@fedoraproject.org - 5.10.1-4 - %check: use 'timeout 180' to avoid hanging tests --------------------------------------------------------------------------------
================================================================================ qt5-qtscxml-5.11.1-3.fc28 (FEDORA-2018-bea1e0b465) Qt5 - ScXml component -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sun Jul 15 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-3 - use %{_qt5_archdatadir}/mkspecs * Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jun 19 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 - use %make_build %ldconfig_scriptlets --------------------------------------------------------------------------------
================================================================================ qt5-qtsensors-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465) Qt5 - Sensors component -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jun 19 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 - use %make_build %ldconfig_scriptlets --------------------------------------------------------------------------------
================================================================================ qt5-qtserialbus-5.11.1-3.fc28 (FEDORA-2018-bea1e0b465) Qt5 - SerialPort component -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sun Jul 15 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-3 - use %{_qt5_archdatadir}/mkspecs/ * Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jun 19 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 - use %make_build %ldconfig_scriptlets --------------------------------------------------------------------------------
================================================================================ qt5-qtserialport-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465) Qt5 - SerialPort component -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jun 19 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0, use %make_build %ldconfig_scriptlets --------------------------------------------------------------------------------
================================================================================ qt5-qtspeech-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465) Qt5 - Speech component -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Wed Jun 20 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 - use %make_build %ldconfig_scriptlets --------------------------------------------------------------------------------
================================================================================ qt5-qtstyleplugins-5.0.0-27.fc28 (FEDORA-2018-bea1e0b465) Classic Qt widget styles -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sun May 13 2018 Rex Dieter rdieter@fedoraproject.org - 5.0.0-27 - use %make_build %make_install * Sun May 13 2018 Rex Dieter rdieter@fedoraproject.org - 5.0.0-26 - drop qgtk2/bb10 conditionals --------------------------------------------------------------------------------
================================================================================ qt5-qtsvg-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465) Qt5 - Support for rendering and displaying SVG -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Wed Jun 20 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 - use %make_build %ldconfig_scriptlets --------------------------------------------------------------------------------
================================================================================ qt5-qttools-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465) Qt5 - QtTool components -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Wed Jun 20 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sat May 26 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 - use %make_build * Thu Mar 8 2018 Rex Dieter rdieter@fedoraproject.org - 5.10.1-2 - BR: qt5-rpm-macros --------------------------------------------------------------------------------
================================================================================ qt5-qttranslations-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465) Qt5 - QtTranslations module -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Wed Jun 20 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 - use %make_build - make BR: qt5-qbase-devel unversioned --------------------------------------------------------------------------------
================================================================================ qt5-qtvirtualkeyboard-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465) Qt5 - VirtualKeyboard component -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Wed Jun 20 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 - use %make_build %ldconfig_scriptlets --------------------------------------------------------------------------------
================================================================================ qt5-qtwayland-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465) Qt5 - Wayland platform support and QtCompositor module -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Wed Jun 20 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 - use %make_build %ldconfig_scriptlets --------------------------------------------------------------------------------
================================================================================ qt5-qtwebchannel-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465) Qt5 - WebChannel component -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Wed Jun 20 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 - use %make_build %ldconfig_scriptlets --------------------------------------------------------------------------------
================================================================================ qt5-qtwebengine-5.11.1-4.fc28 (FEDORA-2018-bea1e0b465) Qt5 - QtWebEngine components -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sun Jul 15 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-4 - BR: /usr/bin/python * Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jul 10 2018 Pete Walter pwalter@fedoraproject.org - 5.11.1-2 - Rebuild for ICU 62 * Fri Jun 22 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Wed Jun 20 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-2 - rebuild (qt5) * Thu Jun 14 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 - drop shadow build (to match other qt5 packages where it has been problematic) - drop upstreamed patches - rebase no-icudtl-dat.patch - pull in upstream gcc8 FTBFS fix - update clean_ffmpeg whitelist - patches needswork: system-nspr-prtime,system-icu-utf,no-sse2,skia-neon,icu59 - minimal debug/debuginfo (for now) - use macros %make_build %ldconfig_scriptlets %__ninja %__ninja_common_opts * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.10.1-7 - rebuild (qt5 5.11.0) - Add patch by spot from the Fedora Chromium RPM for FTBFS with GCC 8 on i686 - include 0027-Fix-compilation-of-simplebrowser-example.patch (5.11 branch) * Mon Apr 30 2018 Pete Walter pwalter@fedoraproject.org - 5.10.1-6 - Rebuild for ICU 61.1 --------------------------------------------------------------------------------
================================================================================ qt5-qtwebkit-5.212.0-0.27.alpha2.fc28 (FEDORA-2018-bea1e0b465) Qt5 - QtWebKit components -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Wed Jul 25 2018 Christian Dersch lupinix@fedoraproject.org - 5.212.0-0.27.alpha2 - Disable annobin for now, workaround for RHBZ #1608549 * Tue Jul 24 2018 Rex Dieter rdieter@fedoraproject.org - 5.212.0-0.26.alpha2 - backport some pkgconfig-related upstream fixes - use %ldconfig_scriptlets * Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.212.0-0.25.alpha2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Tue Jul 10 2018 Pete Walter pwalter@fedoraproject.org - 5.212.0-0.24.alpha2 - Rebuild for ICU 62 * Wed Jun 20 2018 Rex Dieter rdieter@fedoraproject.org - 5.212.0-0.23.alpha2 - rebuild (qt5) * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.212.0-0.22.alpha2 - rebuild (qt5) - workaround gcc8 FTBFS with -fpermissive (#1582954) * Mon Apr 30 2018 Pete Walter pwalter@fedoraproject.org - 5.212.0-0.21.alpha2 - Rebuild for ICU 61.1 --------------------------------------------------------------------------------
================================================================================ qt5-qtwebsockets-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465) Qt5 - WebSockets component -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Wed Jun 20 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 - use %make_build %ldconfig_scriptlets --------------------------------------------------------------------------------
================================================================================ qt5-qtwebview-5.11.1-3.fc28 (FEDORA-2018-bea1e0b465) Qt5 - WebView component -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sun Jul 15 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-3 - use %{_qt5_archdatadir}/mkspecs * Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Wed Jun 20 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 - use %make_build %ldconfig_scriptlets --------------------------------------------------------------------------------
================================================================================ qt5-qtx11extras-5.11.1-2.fc28 (FEDORA-2018-bea1e0b465) Qt5 - X11 support library -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Wed Jun 20 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0, - use %make_build %ldconfig_scriptlets --------------------------------------------------------------------------------
================================================================================ qt5-qtxmlpatterns-5.11.1-3.fc28 (FEDORA-2018-bea1e0b465) Qt5 - QtXmlPatterns component -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 5.11.1-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild * Sat Jun 30 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-2 - rebuild * Tue Jun 19 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.1-1 - 5.11.1 * Wed May 23 2018 Rex Dieter rdieter@fedoraproject.org - 5.11.0-1 - 5.11.0 --------------------------------------------------------------------------------
================================================================================ qt5ct-0.35-2.fc28 (FEDORA-2018-bea1e0b465) Qt5 Configuration Tool -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 0.35-2 - rebuild (qt5) --------------------------------------------------------------------------------
================================================================================ root-6.14.04-1.fc28 (FEDORA-2018-f639426cca) Numerical data analysis framework -------------------------------------------------------------------------------- Update Information:
Root version 6.14.04. https://root.cern.ch/doc/v614/release- notes.html#release-6.1404 -------------------------------------------------------------------------------- ChangeLog:
* Fri Aug 24 2018 Mattias Ellert mattias.ellert@physics.uu.se - 6.14.04-1 - Update to 6.14.04 - Drop patch accepted upstream: root-python-3.7.patch * Thu Aug 23 2018 Nicolas Chauvet kwizart@gmail.com - 6.14.02-2 - Rebuilt for glew 2.1.0 --------------------------------------------------------------------------------
================================================================================ setBfree-0.8.8-1.fc28 (FEDORA-2018-6f112096f9) A DSP Tonewheel Organ emulator -------------------------------------------------------------------------------- Update Information:
Version 0.8.8 -------------------------------------------------------------------------------- ChangeLog:
* Mon Aug 27 2018 Guido Aulisi guido.aulisi@gmail.com - 0.8.8-1 - Version 0.8.8 --------------------------------------------------------------------------------
================================================================================ skrooge-2.14.0-1.fc28 (FEDORA-2018-bea1e0b465) Personal finances manager -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sun Jul 1 2018 Rex Dieter rdieter@fedoraproject.org - 2.14.0-1 - skrooge-2.14.0 (#1594790) * Thu Jun 21 2018 Rex Dieter rdieter@fedoraproject.org - 2.13.0-3 - rebuild (qt5) * Mon May 28 2018 Rex Dieter rdieter@fedoraproject.org - 2.13.0-2 - rebuild (qt5) * Tue May 8 2018 Rex Dieter rdieter@fedoraproject.org - 2.13.0-1 - skrooge-2.13.0 (#1575967) * Mon Apr 2 2018 Bill Nottingham notting@splat.cc - 2.12.0-2 - rebuild for libofx soname change --------------------------------------------------------------------------------
================================================================================ switchboard-plug-sound-0.1.1-1.fc28 (FEDORA-2018-1eb665ea92) Switchboard Sound Plug -------------------------------------------------------------------------------- Update Information:
Update to version 0.1.1. Release notes: https://github.com/elementary /switchboard-plug-sound/releases/tag/0.1.1 -------------------------------------------------------------------------------- ChangeLog:
--------------------------------------------------------------------------------
================================================================================ tcpflow-1.5.0-2.fc28 (FEDORA-2018-5ad77cc979) Network traffic recorder -------------------------------------------------------------------------------- Update Information:
Update to latest upstream release tcpflow 1.5.0. -------------------------------------------------------------------------------- ChangeLog:
* Mon Aug 27 2018 Terje Rosten terje.rosten@ntnu.no - 1.5.0-2 - Still issue with check * Mon Aug 27 2018 Terje Rosten terje.rosten@ntnu.no - 1.5.0-1 - 1.5.0 (includes fix for rhbz#1614046 * Mon Jul 16 2018 Terje Rosten terje.rosten@ntnu.no - 1.4.5-9 - Add C++ compiler * Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 1.4.5-8 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild -------------------------------------------------------------------------------- References:
[ 1 ] Bug #1614046 - CVE-2018-14938 tcpflow: integer overflow vulnerability in wifipacp.cpp [fedora-all] https://bugzilla.redhat.com/show_bug.cgi?id=1614046 --------------------------------------------------------------------------------
================================================================================ texmaker-5.0.2-6.fc28 (FEDORA-2018-bea1e0b465) LaTeX editor -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 1:5.0.2-6 - rebuild (qt5) --------------------------------------------------------------------------------
================================================================================ ugene-1.31.0-3.fc28 (FEDORA-2018-bea1e0b465) Integrated bioinformatics toolkit -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sun Aug 26 2018 Rex Dieter rdieter@fedoraproject.org - 1.31.0-3 - (branch) rebuild for qt5 * Fri Aug 24 2018 Yuliya Algaer yalgaer@fedoraproject.org - 1.31.0-2 - New upstream release --------------------------------------------------------------------------------
================================================================================ upx-3.95-1.fc28 (FEDORA-2018-0d8d15ff89) Ultimate Packer for eXecutables -------------------------------------------------------------------------------- Update Information:
3.95, fixes segfault issues. Also migrated to upstream's lzma fork. -------------------------------------------------------------------------------- ChangeLog:
* Mon Aug 27 2018 Gwyn Ciesla limburgher@gmail - 3.95-1 - 3.95. - Switch to upstream's lzma fork. * Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 3.94-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild -------------------------------------------------------------------------------- References:
[ 1 ] Bug #1612455 - upx (fedora 29) files generated are segfaulting https://bugzilla.redhat.com/show_bug.cgi?id=1612455 [ 2 ] Bug #1550187 - Upx needs patch to work with new version of lzma-sdk https://bugzilla.redhat.com/show_bug.cgi?id=1550187 --------------------------------------------------------------------------------
================================================================================ vim-8.1.328-1.fc28 (FEDORA-2018-e0d551a234) The VIM editor -------------------------------------------------------------------------------- Update Information:
The newest upstream commit -------------------------------------------------------------------------------- ChangeLog:
* Mon Aug 27 2018 Zdenek Dohnal zdohnal@redhat.com - 2:8.1.328-1 - patchlevel 328 * Wed Aug 15 2018 Zdenek Dohnal zdohnal@redhat.com - 2:8.1.287-2 - vim-update.sh - add f29 branch * Wed Aug 15 2018 Zdenek Dohnal zdohnal@redhat.com - 2:8.1.287-1 - patchlevel 287 --------------------------------------------------------------------------------
================================================================================ xdg-desktop-portal-kde-5.13.4-2.fc28 (FEDORA-2018-bea1e0b465) Backend implementation for xdg-desktop-portal using Qt/KF5 -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Wed Aug 22 2018 Rex Dieter rdieter@fedoraproject.org - 5.13.4-2 - rebuild --------------------------------------------------------------------------------
================================================================================ yara-3.8.1-1.fc28 (FEDORA-2018-8344cb89ac) Pattern matching Swiss knife for malware researchers -------------------------------------------------------------------------------- Update Information:
bump to 3.8.1, fix CVE-2018-12034 and CVE-2018-12035 -------------------------------------------------------------------------------- ChangeLog:
* Mon Aug 27 2018 Michal Ambroz <rebus at, seznam.cz> - 3.8.1-1 - bump to 3.8.1 release (#1613093) * Sat Jul 14 2018 Fedora Release Engineering releng@fedoraproject.org - 3.7.1-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild -------------------------------------------------------------------------------- References:
[ 1 ] Bug #1591947 - CVE-2018-12034 yara: out of bounds read in yr_execute_code in libyara/exec.c. [epel-all] https://bugzilla.redhat.com/show_bug.cgi?id=1591947 [ 2 ] Bug #1591946 - CVE-2018-12035 yara: out of bounds write in yr_execute_code in libyara/exec.c [epel-all] https://bugzilla.redhat.com/show_bug.cgi?id=1591946 [ 3 ] Bug #1591948 - CVE-2018-12034 yara: out of bounds read in yr_execute_code in libyara/exec.c. [fedora-all] https://bugzilla.redhat.com/show_bug.cgi?id=1591948 [ 4 ] Bug #1591945 - CVE-2018-12035 yara: out of bounds write in yr_execute_code in libyara/exec.c [fedora-all] https://bugzilla.redhat.com/show_bug.cgi?id=1591945 [ 5 ] Bug #1613093 - yara-3.8.0 is available https://bugzilla.redhat.com/show_bug.cgi?id=1613093 --------------------------------------------------------------------------------
================================================================================ yarock-1.3.1-2.fc28 (FEDORA-2018-bea1e0b465) Lightweight, beautiful music player -------------------------------------------------------------------------------- Update Information:
Qt 5.11.1 Release, see also http://blog.qt.io/blog/2018/05/22/qt-5-11-released/ and http://blog.qt.io/blog/2018/06/19/qt-5-11-1-released/ ---- The new version of ugene introduces a lot of major features for NGS data analysis: 1. Quality control: a new tool Trimmomatic was integrated for quality control of NGS reads. It allows one to cut Illumina adapters, trim reads ends by quality, trim reads by length, etc. 2. De novo assembly: SPAdes was updated to version 3.12.0. Graphical interface for the tool in UGENE was updated. It is now possible to input hybrid data, for example, assemble Illumina and Oxford Nanopore reads. 3. Metagenomics: a new infrastructure for taxonomy classification of whole-genome shotgun sequencing data was developed. This includes tools Kraken, CLARK, DIAMOND, WEVOTE and other. Reference data for the tools are also provided: NCBI taxonomy information; RefSeq data for viruses, bacteria, human; etc. 4. Transcriptomics: a new tool StringTie was integrated. -------------------------------------------------------------------------------- ChangeLog:
* Sun May 27 2018 Rex Dieter rdieter@fedoraproject.org - 1.3.1-2 - rebuild (qt5) --------------------------------------------------------------------------------