May 2020 - Neurofedora - Fedora mailing-lists

Fwd: Interested as a NeuroFedora Trainee
by Aniket Pradhan 30 May '20

30 May '20

Hello Kanishk Glad to hear from you. I'll reroute your email to the mailing list so that the members can see your email. > ---------- Forwarded message --------- > From: Kanishk Kalra <kanishkkalra10(a)gmail.com> > Date: Fri, May 29, 2020 at 7:24 PM > Subject: Interested as a NeuroFedora Trainee > To: <neurofedora-owner(a)lists.fedoraproject.org> > > > Dear NeuroFedorians, > > I am Kanishk Kalra, a final year CS undergraduate student from India. I have decent knowledge and experience in working with Python, OpenCV and PyTorch. I am inclined towards exploring interdisciplinary problems related to Computer Vision. > > I am completely new to the field of computational neuroscience and started exploring about it this year itself. As per the post on Neurostars forum, I would love to get involved as a trainee and contribute towards neuro-imaging and data analysis in Neuroscience. > > Please find my CV attached for your reference. > > I hope that everyone is staying safe in this COVID-19 pandemic. > > Yours Sincerely, > Kanishk It's great that you would like to contribute towards neuro-imaging and data analysis. It would be great if you could come around our messaging channels [1] and we can discuss more about it there if you prefer those over email threads. [1]: https://docs.fedoraproject.org/en-US/neurofedora/communicating/ -- Thanks Regards Aniket Pradhan http://home.iiitd.edu.in/~aniket17133/ Aliases: MeWjOr/major () ascii ribbon campaign - against html e-mail /\ www.asciiribbon.org - against proprietary attachments

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Error while compiling mod file
by Mohácsi Máté 30 May '20

30 May '20

Dear Developers and Users! I had some problem on Fedora 32 Comp Neuro Lab compiling NEURON mod files, using 'nrnivmodl'. Error message is the follwing: '/bin/sh: /usr/share/nrn/libtool: No such file or directory' However on my ubuntu the same method with the same project worked. Does anyone encountered the same problem? Thanks and Regards, Máté

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CompNeuro Lab abstract accepted at CNS*2020
by Ankur Sinha 29 May '20

29 May '20

Hello everyone, Just a quick FYI! Our abstract on CompNeuroFedora was accepted at CNS*2020[1]. Once we know if its a poster or an oral presentation, we'll begin working on it. I tweeted about this from our Twitter account just now: https://twitter.com/NeuroFedora/status/1266304727739887618?s=20 Thanks for all your work everyone! We'll make sure we keep submitting to conferences to keep the research community up to date with our progress. As a general policy, everyone that contributes in any way at all since the previous publication will be added as a co-author to the submissions. I've also been contacted by a few of the developers for various tools asking how they could get their software into NeuroFedora, so we must be doing something right :) [1] https://www.cnsorg.org/cns-2020 -- Thanks, Regards, Ankur Sinha "FranciscoD" (He / Him / His) | https://fedoraproject.org/wiki/User:Ankursinha Time zone: Europe/London

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Interest in Being a Trainee for NeuroFedora!
by Audrey Jiang 25 May '20

25 May '20

Dear NeuroFedora: Hope this email finds you well. My name is Audrey (Zhuohan) Jiang, and I am a Neuroscience recent grad from Smith College, MA. I saw your message on NeuroStars and am interested in being a trainee for the project in Neuro-imaging and data analysis in Neuroscience. I had the experience last summer working on a Nipype project, and through that experience, I gained some knowledge in neuroimaging data analysis. Attached is my CV for your reference. I would like to talk more about this project at your convenience through email or Zoom. Thank you for your consideration! Looking forward to hearing back from you! Best Regards, Audrey

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NeuroFedora twitter account is up: need account managers
by Ankur Sinha 22 May '20

22 May '20

Hello everyone, The NeuroFedora twitter account is now up: https://twitter.com/NeuroFedora We need a few people to manage the account: tweet regularly about our activities, and re-tweet others and follow them and so on. If you'd like to do that, please let me know off-list and I will share the credentials with you. I've written a short SOP here for all managers: https://pagure.io/neuro-sig/NeuroFedora/blob/master/f/Outreach/Template-twe… Please open PRs to add more templates and make other general improvements. -- Thanks, Regards, Ankur Sinha "FranciscoD" (He / Him / His) | https://fedoraproject.org/wiki/User:Ankursinha Time zone: Europe/London

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Informal meeting to discuss neuro-imaging tools and plan out how to work on them
by Ankur Sinha 22 May '20

22 May '20

Hello everyone, @mhough, @major, and I are trying to have a short video call to discuss the neuro-imaging tools that we need to work on: our *next* lab image :D Here is the whenisgood: http://whenisgood.net/qxcppah Please fill it out, and if we can find a slot where more folks can join, that'll be great too. -- Thanks, Regards, Ankur Sinha "FranciscoD" (He / Him / His) | https://fedoraproject.org/wiki/User:Ankursinha Time zone: Europe/London

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[Fwd] [NEST Users] NEST Conference 2020 goes virtual — Call for Contributions
by Ankur Sinha 19 May '20

19 May '20

The annual NEST conference will be held online. I'll make a submission for NeuroFedora when I have the time. I encourage others to register too. ----- Forwarded message from Anne Elfgen <a.elfgen(a)fz-juelich.de> ----- > Date: Thu, 30 Apr 2020 17:35:06 +0200 > To: users(a)nest-simulator.org > Subject: [NEST Users] NEST Conference 2020 goes virtual — Call for > Contributions > Archived-At: <https://mail.nest-initiative.org/mailinglist/hyperkitty/list/users@nest-sim…> > > Dear all, > > The NEST Initiative is excited to invite everyone interested in Neural > Simulation Technology and the NEST Simulator to the NEST Conference 2020. > > The NEST Conference provides an opportunity for the NEST Community to meet, > exchange success stories, swap advice, learn about current developments in and > around NEST spiking network simulation and its application. > > This year's conference will take place as a virtual conference on Monday/ > Tuesday 29/30 June 2020. > > We are now inviting contributions to the conference, including plenary talks, > "posters" and breakout sessions on specific topics. > > > > Important dates > > 01 June 2020 — Deadline for submission of contributions > > 08 June 2020 — Notification of acceptance > > 10 June 2020 — Deadline for NEST Initiative Membership applications > (registration is free for members in 2020) > > 22 June 2020 — Registration deadline > > 29 June 2020 — NEST Conference 2020 starts > > > > For more information on how to submit your contribution, register and > participate, please visit the conference website > > https://nest-simulator.org/conference > > > We are looking forward to seeing you all in June! > > Hans Ekkehard Plesser, Susanne Kunkel, Dennis Terhorst, Anne Elfgen & many more > > NEST Users mailing list -- users(a)nest-simulator.org > To unsubscribe send an email to users-leave(a)nest-simulator.org ----- End forwarded message ----- -- Thanks, Regards, Ankur Sinha "FranciscoD" (He / Him / His) | https://fedoraproject.org/wiki/User:Ankursinha Time zone: Europe/London

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Next Open NeuroFedora Meeting: 1800 UTC on Monday, 11th April.
by Ankur Sinha 19 May '20

19 May '20

Hello everyone, Please join us at the next Open NeuroFedora team meeting this week on Monday (today) at 1800UTC in #fedora-neuro on IRC (Freenode). https://webchat.freenode.net/?channels=#fedora-neuro The channel is bridged to Telegram, so you can also join us there on the @NeuroFedora group: https://t.me/NeuroFedora You can convert the meeting time to your local time using this command in a terminal: $ date --date='TZ="UTC" 1800 next Mon' or you can use this link: https://www.timeanddate.com/worldclock/fixedtime.html?msg=NeuroFedora+Meeti… The meeting will be chaired by @ankursinha. The agenda for the meeting is: - New introductions and roll call. - Tasks from last week's meeting: https://meetbot.fedoraproject.org/teams/neurofedora/neurofedora.2020-04-27-… - Open Pagure tickets: https://pagure.io/neuro-sig/NeuroFedora/issues?status=Open&tags=S%3A+Next+m… - CompNeuro lab compose status check. - Neuroscience query of the week. - Next meeting day, and chair. - Open floor. We hope to see you there! -- Thanks, Regards, Ankur Sinha "FranciscoD" (He / Him / His) | https://fedoraproject.org/wiki/User:Ankursinha Time zone: Europe/London

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[Fwd] Re-Launching the Java SIG
by Ankur Sinha 12 May '20

12 May '20

For folks looking to learn more Java, this is an excellent opportunity. ----- Forwarded message from Fabio Valentini <decathorpe(a)gmail.com> ----- > Date: Mon, 11 May 2020 21:45:15 +0200 > From: Fabio Valentini > Subject: Re-Launching the Java SIG > Archived-At: <https://lists.fedoraproject.org/archives/list/stewardship-sig@lists.fedorap…> > > This past weekend I finally decided to jump off the cliff and attempt > to re-launch the Java SIG. It seems there's some interest in keeping > the Java stack maintained, it's just not focused or organized right > now. > > What we did when starting the Stewardship SIG seems to have worked out > pretty well, so I'm trying to follow in those footsteps here: > > - new proper FAS / pkgdb group: java-maint-sig ("java-sig" is occupied > by an old, unused bot account) > - new private mailing list: java-maint-sig (for RHBZ bugs - so, > possibly, also CVEs - hence, private) > - tracking project on pagure: https://pagure.io/java-maint-sig (for > maintenance scripts, tracking tickets, awesome package dashboards, > etc.) > > There's already a public fedora mailing list for Java (java-devel), > and and IRC channel (#fedora-java on freenode.net), which we will > continue to use. Sadly, the existing wiki page for the Java SIG is > hopelessly outdated, so I'm tempted to just scrap it and point readers > to the pagure tracking project once it's set up beyond a basic README > file. > > Major upcoming projects for the "new" Java Package Maintainers group include: > > - managing OpenJDK 11 / Java 11 transition for hundreds of Java > packages in fedora 33 > - starting to transition well-maintained Java packages from the > Stewardship SIG back into Java SIG > - possibly porting packages from gradle to maven to fix build issues > and broken dependencies > - transitioning from old java.net / JavaEE projects to the new ones > now under the eclipse-ee4j umbrella > > I know that - among others - the PKI team, Neuro SIG, and Eclipse > maintainers depend on parts of the java stack for their packages, so I > hope that we can work together with them on these things, as well. > > So, if you're interested, please consider joining this group effort. > I'll get new members set up with the FAS group / pagure project / mailing list. > > Let's make this happen. > Fabio > _______________________________________________ ----- End forwarded message ----- -- Thanks, Regards, Ankur Sinha "FranciscoD" (He / Him / His) | https://fedoraproject.org/wiki/User:Ankursinha Time zone: Europe/London

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Fwd: [Mne_analysis] Call for talks in the OHBM Open Science Room
by Morgan Hough 11 May '20

11 May '20

---------- Forwarded message --------- From: Camille Maumet <camille.maumet(a)inria.fr> Date: Mon, May 11, 2020 at 12:57 PM Subject: [Mne_analysis] Call for talks in the OHBM Open Science Room To: mne analysis <mne_analysis(a)nmr.mgh.harvard.edu> External Email - Use Caution Dear member of MNE, The OHBM Open Science Special Interest Group (OS-SIG) <https://zimbra.inria.fr/ossig.netlify.com/> would like to share two exciting announcements! 1. Our call is now open for talks, demos, and discussions in this year's virtual Open Science Room (OSR). Submit your idea now! <https://ohbm.github.io/osr2020/submit/> 2. We are providing 20 mini-grants worth 100 USD each to help OSR speakers set up for online conferencing. Apply via the link above. The first deadline for submission is 15 May 2020, after which initial talk recordings will start. The second and last deadline is on 15 June. For more information, please visit the OSR website <https://ohbm.github.io/osr2020/> and our FAQ <https://ohbm.github.io/osr2020/faq/>. What happens in the OSR? The OSR is the place for OHBM meeting attendees to discuss open research practices, learn from each other, collaborate, and to foster and grow an open and inclusive community. This year, presentations and discussions will focus on three main themes <https://ohbm.github.io/osr2020/themes/>: 1. Open Workflows 2. Open Data 2.0 3. The Past, Present and Future of Open Neuroimaging We will have keynotes, lightning talks and demos <https://ohbm.github.io/osr2020/formats/>, all related to the OSR themes, while emergent sessions can be scheduled for impromptu discussions. Can you contribute? We would also love for the community to be involved in building an unforgettable OSR experience. Please find more information about contributor roles and sign up here <https://ohbm.github.io/osr2020/contribute/>! We thank Openneuro <https://openneuro.org/>, INCF <https://www.incf.org/>, CNeuroMod <https://www.cneuromod.ca/>, The Ludmer <http://ludmercentre.ca/> and CONP <https://conp.ca/>, for their generous contributions in support of the OS-SIG If you have any questions, please reach out to us at ohbm.osr(a)gmail.com and follow @OHBMopen <https://twitter.com/ohbmopen> on Twitter or visit the OSR website <https://ohbm.github.io/osr2020/> for updates. Kind regards, Camille Maumet, Cassandra Gould van Praag and Stephan Heunis, on behalf of the OS-SIG -- OSR 2020 website <https://ohbm.github.io/osr2020/> OS-SIG website <https://ossig.netlify.app/> -- Camille Maumet, PhD Researcher Inria, Univ Rennes, CNRS, Inserm Campus de Beaulieu 35042 Rennes Cedex, France _______________________________________________ Mne_analysis mailing list Mne_analysis(a)nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis

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